rRNA 16S sequencing of In Situ Chemotaxis Assay experiment - SRA

SRX26809738: rRNA 16S sequencing of In Situ Chemotaxis Assay experiment
1 ILLUMINA (Illumina MiSeq) run: 21,111 spots, 6.4M bases, 3.5Mb downloads

Design: nested PCR of the rRNA 16S gene

Submitted by: Mediterranean Institute of Oceanography

Study: Dynamics of diazotroph particle colonization in the Arctic Ocean - rRNA 16S

PRJNA1189317 • SRP546917 • All experiments • All runs

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Artificial particles (Alginate and agarose) were incubated for different times in an In Situ Chemotaxis Assay (ISCA) at different stations during an oceanographic campaign in the Arctic Ocean (N-ARC, DY167), in the Barents Sea.The DNA of these unique artificial particles was extracted, and the nifH and 16S rRNA genes were amplified and sequenced.

Sample:

SAMN44959200 • SRS23294923 • All experiments • All runs

Organism: marine bacterium

Library:

Name: 2682

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 21,111 spots, 6.4M bases, 3.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR31440846	21,111	6.4M	3.5Mb	2024-11-22

ID:: 36227724

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